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Task #12085 (closed)

Opened 10 years ago

Closed 9 years ago

Last modified 9 years ago

Bug: Incorrect rendering of Veeco AFM data

Reported by: rleigh Owned by: jburel
Priority: major Milestone: n.a.
Component: Insight Version: 5.0.0
Keywords: n.a. Cc:
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: 0.0d
Sprint: n.a.

Description

These images are of signed 16 bit integer pixel type.

See attached screenshots for an illustration of how these appear with showinf (correct) and insight (incorrect).

Attachments (2)

veeco-showinf.png (32.1 KB) - added by rleigh 10 years ago.
showinf
veeco-insight.png (157.3 KB) - added by rleigh 10 years ago.
insight

Download all attachments as: .zip

Change History (4)

Changed 10 years ago by rleigh

showinf

Changed 10 years ago by rleigh

insight

comment:1 Changed 9 years ago by mlinkert

  • Resolution set to fixed
  • Status changed from new to closed

This was not a bug in Insight, but rather further work that needed to be done in https://github.com/openmicroscopy/bioformats/pull/858.

comment:2 Changed 9 years ago by Melissa Linkert <melissa@…>

  • Remaining Time set to 0

(In [053db803811734ca873226fbea87fed40bafea21/bioformats.git] on branch develop) Correct for variable endianness when decoding the same file

The same file on different platforms or in different contexts won't
always be read with the same endianness by netCDF. This corrects the
endianness to be used when unpacking short values by choosing the
narrower of the two possible min/max ranges.

Fixes #12085.

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