Kymograph Analysis into single csv

[wmoore]

From today's drop-in session:

Currently, running Kymograph Analysis on several Kymographs will generate one csv per image, which makes download and compilation of the results painful.

Very straight-forward to combine into a single csv file.

Once this fix is merged into develop, I will upload the fixed script to nightshade so that current users can benefit without waiting for OMERO 5.

[wmoore]

​https://github.com/ome/scripts/pull/60

[Snoopy Crime Cop <snoopycrimecop@…>]

(In [2d153d4694e994743baf2914e27ba23cd6fec39e/ome.git] on branch develop) Update develop submodules

Repository: openmicroscopy/openmicroscopy
Already up-to-date.

Repository: openmicroscopy/bioformats
Updating af4ff14..8166648
Merged PRs (fast-forward):

# PR 944 melissalinkert 'Remaining renaming'
# PR 948 hflynn 'Updating Aperio ImageScope? weblink (rebased onto develop)'
# PR 923 LeeKamentsky? 'Patch for CellProfiler? issue 1043 - Cellomics files with renamed filenames'
# PR 935 sbesson 'Logback 2 (incl. docs) (rebased onto develop)'
# PR 926 ctrueden 'Cache OME-XML between ImagePluses?'
# PR 906 sbesson 'MATLAB toolbox: package and release fixes (rebased onto develop)'
# PR 897 melissalinkert 'Implement pre-loading for .sdt files in the interest of performance. (rebased onto develop)'
# PR 891 melissalinkert 'Fix tiled TIFF reading and writing (rebased onto develop)'
# PR 886 melissalinkert 'Flex: be more permissive in parsing IFDs and XML'
# PR 884 rleigh-dundee 'Make a buildable source release'
# PR 885 melissalinkert 'Correctly set Modulo annotations for multi-Image datasets'
# PR 910 joshmoore 'Logback conversion (rebased onto develop)'
# PR 934 ctrueden 'Remove Eclipse metadata file'
# PR 938 hflynn 'Fixing IDL links (rebased onto develop)'
# PR 898 joshmoore 'Create bioformats_package.jar (rebased onto develop)'
# PR 866 melissalinkert 'Update POMs to point to mirror of the cppwrap plugin (rebased onto develop)'

Repository: ome/scripts
Updating 3e885a7..b78c468
Merged PRs (fast-forward):

# PR 60 will-moore 'Kymograph_Analysis creates single csv. See #11909'

Repository: openmicroscopy/ome-documentation
Updating 593cd49..40ecbfe
Merged PRs (fast-forward):

# PR 684 jballanc 'Update documentation for search indexer and related troubleshooting steps (see #11995) (rebased onto develop)'
# PR 682 sbesson 'Document scc 0.5.0 changes'
# PR 674 hflynn 'Add details for omero_home usage (rebased onto develop)'
# PR 675 ximenesuk 'Update cli-import page (rebased on develop)'
# PR 673 hflynn 'what's new for 5.0 updates (rebased onto develop)'
# PR 663 manics 'Windows 64-bit python 11899 (rebased onto develop)'
# PR 660 sbesson 'Update documentation to use Pillow instead of PIL (rebased onto develop)'
# PR 671 hflynn 'Using right redirects for 5 downloads (rebased onto develop)'
# PR 665 hflynn 'Update 5 docs for release changes (rebased onto develop)'
# PR 659 ximenesuk 'Update docs for import and logging fixes (rebased on develop)'

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