Task #2368 (closed)
Opened 14 years ago
Closed 14 years ago
BUG: stk
Reported by: | jburel | Owned by: | cxallan |
---|---|---|---|
Priority: | blocker | Milestone: | OMERO-Beta4.2 |
Component: | Import | Version: | n.a. |
Keywords: | n.a. | Cc: | cxallan |
Resources: | n.a. | Referenced By: | n.a. |
References: | n.a. | Remaining Time: | 0.0d |
Sprint: | 2010-05-13 (9) |
Description
23srp..sub.stk
serverExceptionClass = "ome.conditions.InternalException" message = " Wrapped Exception: (java.lang.NullPointerException): null" at ome.formats.OMEROMetadataStoreClient.saveToDB(OMEROMetadataStoreClient.java:1800) at ome.formats.importer.ImportLibrary.importMetadata(ImportLibrary.java:257) at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:436) at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:340) at ome.formats.importer.gui.ImportHandler.importImages(ImportHandler.java:215) at ome.formats.importer.gui.ImportHandler.access$100(ImportHandler.java:59) at ome.formats.importer.gui.ImportHandler$2.run(ImportHandler.java:134) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:417) at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:269) at java.util.concurrent.FutureTask.run(FutureTask.java:123) at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$301(ScheduledThreadPoolExecutor.java:65) at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:172) at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:651) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:676) at java.lang.Thread.run(Thread.java:613) Caused by: omero.InternalException serverStackTrace = "ome.conditions.InternalException: Wrapped Exception: (java.lang.NullPointerException): null at ome.formats.OMEROMetadataStore.handle(OMEROMetadataStore.java:753) at ome.formats.OMEROMetadataStore.updateObject(OMEROMetadataStore.java:234)
Change History (11)
comment:1 Changed 14 years ago by cxallan
- Status changed from new to assigned
comment:2 Changed 14 years ago by cxallan
- Status changed from assigned to closed
comment:3 follow-up: ↓ 8 Changed 14 years ago by cxallan
comment:4 Changed 14 years ago by cxallan
- Status changed from closed to reopened
comment:5 Changed 14 years ago by cxallan
- Owner changed from bwzloranger to mlinkert-x
- Status changed from reopened to new
comment:6 follow-up: ↓ 7 Changed 14 years ago by cxallan
Vis-a-vis #2403, the Detector.Zoom also has a mismatch between 4.1.1 (0.0), 4.1.2-latest (100.0) and 4.2.x (100.0) for 23srp5dksub.stk. Is this correct?
comment:7 in reply to: ↑ 6 Changed 14 years ago by mlinkert
comment:8 in reply to: ↑ 3 Changed 14 years ago by mlinkert
Replying to cxallan:
Exception with one file:
2010-05-19 15:22:51,532 1437785 [2-thread-1] ERROR importer.gui.ErrorHandler?$MyErrorHandler? - INTERNAL_EXCEPTION: /Users/callan/testimages/stk/EXPERIMENT38_w1FITC_t1.stk
java.lang.NumberFormatException?: For input string: "16-bit (1 MHz)"
Fixed in bio-formats:r6354.
comment:9 Changed 14 years ago by cxallan
- Status changed from new to assigned
comment:10 Changed 14 years ago by cxallan
- Owner changed from mlinkert-x to cxallan
comment:11 Changed 14 years ago by cxallan
- Remaining Time set to 0
- Resolution set to fixed
- Status changed from assigned to closed
Exception with one file: