Task #4999 (closed)
BUG: omero script params
Reported by: | wmoore | Owned by: | jamoore |
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Priority: | major | Milestone: | OMERO-Beta4.3 |
Component: | Scripting | Version: | n.a. |
Keywords: | n.a. | Cc: | |
Resources: | n.a. | Referenced By: | n.a. |
References: | n.a. | Remaining Time: | 0.0d |
Sprint: | n.a. |
Description
wjm:scripts will$ omero script replace 3 omero/export_scripts/Batch_Image_Export.py Using session c2fd5202-8185-47bb-8721-a20c6495d377 (root@localhost:4064). Idle timeout: 10.0 min. Current group: system wjm:scripts will$ omero script params 3 Using session c2fd5202-8185-47bb-8721-a20c6495d377 (root@localhost:4064). Idle timeout: 10.0 min. Current group: system id: 3 name: Batch_Image_Export.py version: 4.3.0 authors: William Moore, OME Team institutions: University of Dundee description: Save multiple images as jpegs, pngs etc in a zip file available for download as a batch export. See http://www.openmicroscopy.org/site/support/omero4/getting-started/tutorial/running-util-scripts namespaces: stdout: text/plain stderr: text/plain inputs: OR_specify_T_start_AND... - Choose a specific T-index to export Optional: True Type: ::omero::RInt Min: Max: Values: Export_Individual_Channels - Save individual channels as separate images Optional: True Type: ::omero::RBool Min: Max: Values: OR_specify_Z_index - Choose a specific Z-index to export Optional: True Type: ::omero::RInt Min: Max: Values: Choose_Z_Section - Default Z is last viewed Z for each image, OR choose Z below. Optional: True Type: ::omero::RString Min: Max: Values: Default-Z (last-viewed), ALL Z planes, Other (see below) Choose_T_Section - Default T is last viewed T for each image, OR choose T below. Optional: True Type: ::omero::RString Min: Max: Values: Default-T (last-viewed), ALL T planes, Other (see below) OR_specify_Z_start_AND... - Choose a specific Z-index to export Optional: True Type: ::omero::RInt Min: Max: Values: Format - Format to save image Optional: True Type: ::omero::RString Min: Max: Values: JPEG, PNG Channel_Names - Names for saving individual channel images Optional: True Type: ::omero::RList Traceback (most recent call last): File "/Users/will/Desktop/OMERO/dist/bin/omero", line 123, in <module> rv = omero.cli.argv() File "/Users/will/Desktop/OMERO/dist/lib/python/omero/cli.py", line 1163, in argv cli.invoke(args[1:]) File "/Users/will/Desktop/OMERO/dist/lib/python/omero/cli.py", line 716, in invoke stop = self.onecmd(line, previous_args) File "/Users/will/Desktop/OMERO/dist/lib/python/omero/cli.py", line 785, in onecmd self.execute(line, previous_args) File "/Users/will/Desktop/OMERO/dist/lib/python/omero/cli.py", line 865, in execute args.func(args) File "/Users/will/Desktop/OMERO/dist/lib/python/omero/plugins/script.py", line 442, in params print_params("inputs:", job_params.inputs) File "/Users/will/Desktop/OMERO/dist/lib/python/omero/plugins/script.py", line 435, in print_params self.ctx.out(" Subtype: %s" % v.prototype.val[0].ice_staticId()) IndexError: list index out of range wjm:scripts will$
Change History (2)
comment:1 Changed 13 years ago by jmoore <josh@…>
- Remaining Time set to 0
- Resolution set to fixed
- Status changed from new to closed
comment:2 Changed 13 years ago by jmoore <josh@…>
(In [2d4f6fbbf753af749b9daccdfc863f3b69fe6b4d/ome.git] on branch develop) Fix another NoneType issue (See #4999)
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(In [09fbd36d6ea56aac74b40758e2bdfe82ae09abe2/ome.git] on branch develop) Fixing index out of range on bin/omero script params (Fix #4999)