BUG: Bulk annotations script - Insight

[pwalczysko]

The Bulk annotations script is not visible in Insight when Plate is inside a Screen.

Gretzky
user-4
read-write-1
Screen ID: 651 (this Screen has a plate inside which should have been annotated by the script)
Plate ID: 1752 (=the orphaned plate with no Screen)

When executing the ​https://www.openmicroscopy.org/private/ome-internal/testing_scenarios/BulkAnnotations.html, the execution of the script went well (user-4 in read-write-1, which is the default group, but see also ​https://trac.openmicroscopy.org.uk/ome/ticket/12210 for permissions problems here).

The annotations are visible in Insight in case of orphaned Plate (see screenslhot). If the script is executed on a Screen (with the plate inside), the annotations are not displayed in Insight.
see screenshot

This was repeated on localhost (5.0.1 release server) as well as on gretzky (merge build)

Web
The annotations which are missing in Insight are displayed in Web only partially, with the row titles there, but the values say "undefined" (see screenshot).

The output of the command line (first paragraph is the fully successful run of the script on orphaned plate, second paragraph the semi-successful run on a screen):

Clasifying as a blocker because this is a regression in comparison with the situation when the script was tested last time (4.4.x times)

Note that the annotation Bulk Annotation was attached to the Screen as expected (attached also to this ticket), but no annotations were visible on single wells in Insight.

[petr@LS25165 ~/Work/omero5-server/OMERO.server-5.0.1-190-e58c9fb-ice33-b208/lib/python]$ PYTHONPATH=$PYTHONPATH:. python omero/util/populate_metadata.py -s gretzky.openmicroscopy.org.uk -u user-4 -w ome Plate:1752 ~/Desktop/test_plate.csv
INFO:omero.util.Resources:Starting
INFO:omero.util.populate_metadata:Missing plate name column, skipping.
INFO:omero.util.populate_metadata:Missing plate name column, skipping.
INFO:omero.util.populate_metadata:Missing plate name column, skipping.
INFO:omero.util.populate_metadata:Missing plate name column, skipping.
INFO:omero.util.populate_metadata:Missing plate name column, skipping.
INFO:omero.util.populate_metadata:Missing plate name column, skipping.
INFO:omero.util.populate_metadata:Missing plate name column, skipping.
INFO:omero.util.populate_metadata:Missing plate name column, skipping.
INFO:omero.util.populate_metadata:Missing plate name column, skipping.
INFO:omero.util.populate_metadata:Missing plate name column, skipping.
INFO:omero.util.populate_metadata:Missing plate name column, skipping.
INFO:omero.util.populate_metadata:Missing plate name column, skipping.
INFO:omero.util.populate_metadata:Missing plate name column, skipping.
INFO:omero.util.populate_metadata:Missing plate name column, skipping.
INFO:omero.util.populate_metadata:Missing plate name column, skipping.
INFO:omero.util.populate_metadata:Missing plate name column, skipping.
INFO:omero.util.populate_metadata:Created new table OriginalFile:66092
INFO:omero.util.populate_metadata:Table initialized with 9 columns.
INFO:omero.util.populate_metadata:Added data column data.
INFO:omero.util.Resources:Halted
[petr@LS25165 ~/Work/omero5-server/OMERO.server-5.0.1-190-e58c9fb-ice33-b208/lib/python]$ PYTHONPATH=$PYTHONPATH:. python omero/util/populate_metadata.py -s gretzky.openmicroscopy.org.uk -u user-4 -w ome Screen:651 ~/Desktop/test_screen.csv
INFO:omero.util.Resources:Starting
WARNING:omero.util.populate_metadata:Screen is missing plate: 365700055641
WARNING:omero.util.populate_metadata:Screen is missing plate: 365700055641
WARNING:omero.util.populate_metadata:Screen is missing plate: 365700055641
WARNING:omero.util.populate_metadata:Screen is missing plate: 365700055641
WARNING:omero.util.populate_metadata:Screen is missing plate: 365700055641
WARNING:omero.util.populate_metadata:Screen is missing plate: 365700055641
WARNING:omero.util.populate_metadata:Screen is missing plate: 365700055641
WARNING:omero.util.populate_metadata:Screen is missing plate: 365700055641
WARNING:omero.util.populate_metadata:Screen is missing plate: 365700055641
WARNING:omero.util.populate_metadata:Screen is missing plate: 365700055641
WARNING:omero.util.populate_metadata:Screen is missing plate: 365700055641
WARNING:omero.util.populate_metadata:Screen is missing plate: 365700055641
WARNING:omero.util.populate_metadata:Screen is missing plate: 365700055641
WARNING:omero.util.populate_metadata:Screen is missing plate: 365700055641
WARNING:omero.util.populate_metadata:Screen is missing plate: 365700055641
WARNING:omero.util.populate_metadata:Screen is missing plate: 365700055641
INFO:omero.util.populate_metadata:Created new table OriginalFile:66093
INFO:omero.util.populate_metadata:Table initialized with 11 columns.
INFO:omero.util.populate_metadata:Added data column data.
INFO:omero.util.Resources:Halted
[petr@LS25165 ~/Work/omero5-server/OMERO.server-5.0.1-190-e58c9fb-ice33-b208/lib/python]$