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Changes between Initial Version and Version 1 of Ticket #11784


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Timestamp:
12/04/13 12:15:38 (10 years ago)
Author:
rleigh
Comment:

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  • Ticket #11784

    • Property Component changed from from QA to Bio-Formats
  • Ticket #11784 – Description

    initial v1  
    11[https://www.openmicroscopy.org/qa2/qa2/qa/feedback/7748/] 
    2 [[BR]] 
    3 {{{ 
    4 For big planes (~10000x10000 in this case), it looks like we are miscalculating the offsets in the CZI reader; this results in odd banding and wrapping of the image.  I'll attach an image of the misrendered plane to illustrate. 
    5 }}} 
     2 
     3For big planes (~10000x10000 in this case), it looks like we are miscalculating the offsets in the CZI reader; this results in odd banding and wrapping of the image.  I have attached an image of the misrendered plane to illustrate. 
     4 
     5I have put in /ome/team/rleigh/czi: 
     6 
     7- IP-Stitching-04.czi (original file; opens fine with Zen Blue 2012) 
     8- IP-Stitching-04-zenblue.ome.tiff (zen blue exported ome-tiff; uses 2010-06 schema and the metadata is incorrect, but it opens and displays correctly) 
     9- IP-Stitching-04-bfconv.ome.tiff (original file converted to ome-tiff with bfconvert; valid pixels is 16 bit, but should really be 12; could the CZI reader be updated to set the valid pixels correctly?--it's correct for the CZI image) 

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