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Ticket #10116: Insight Log Gus Hang 13-01-10.txt

File Insight Log Gus Hang 13-01-10.txt, 5.8 KB (added by rkferguson, 11 years ago)
Line 
12013-01-10 10:35:17,160 INFO  [       ome.formats.importer.ImportConfig] (Thread-351) OMERO Version: 4.4.4-766-7e18246-dirty-ice33-b111
22013-01-10 10:35:17,161 INFO  [       ome.formats.importer.ImportConfig] (Thread-351) Bioformats version: 4.5-DEV revision: c6ff3cd date: 10 January 2013
32013-01-10 10:35:25,841 ERROR [opy.shoola.agents.imviewer.BirdEyeLoader] (entQueue-0) Bird Eye Retrieval Failure: java.lang.Exception: No bird eye view.
42013-01-10 10:36:09,432 ERROR [py.shoola.env.data.OmeroImageServiceImpl] (Thread-579) Thumbnail service null for pixelsID: [401, 399]
52013-01-10 10:39:54,681 ERROR [opy.shoola.agents.imviewer.BirdEyeLoader] (entQueue-0) Bird Eye Retrieval Failure: java.lang.Exception: No bird eye view.
62013-01-10 10:41:04,048 DEBUG [copy.shoola.env.data.DataServicesFactory] (Thread-632) Connection ErrorIce.SocketException
7    error = 0
8        at IceInternal.Selector.setInterrupt(Selector.java:347)
9        at IceInternal.Selector.remove(Selector.java:107)
10        at IceInternal.ThreadPool.finish(ThreadPool.java:183)
11        at Ice.ConnectionI.setState(ConnectionI.java:1454)
12        at Ice.ConnectionI.setState(ConnectionI.java:1351)
13        at Ice.ConnectionI.sendRequest(ConnectionI.java:383)
14        at IceInternal.ConnectionRequestHandler.sendRequest(ConnectionRequestHandler.java:36)
15        at IceInternal.Outgoing.invoke(Outgoing.java:66)
16        at omero.api._IMetadataDelM.loadAnnotations(_IMetadataDelM.java:260)
17        at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:320)
18        at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:292)
19        at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2739)
20        at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredAnnotations(OmeroMetadataServiceImpl.java:1022)
21        at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:707)
22        at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:811)
23        at org.openmicroscopy.shoola.env.data.views.calls.StructuredAnnotationLoader$6.doCall(StructuredAnnotationLoader.java:211)
24        at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144)
25        at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226)
26        at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126)
27        at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165)
28        at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276)
29        at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91)
30        at java.lang.Thread.run(Thread.java:680)
31Caused by: java.nio.channels.ClosedByInterruptException
32        at java.nio.channels.spi.AbstractInterruptibleChannel.end(AbstractInterruptibleChannel.java:184)
33        at sun.nio.ch.SinkChannelImpl.write(SinkChannelImpl.java:153)
34        at IceInternal.Selector.setInterrupt(Selector.java:343)
35        ... 22 more
36Connection ErrorIce.SocketException
37    error = 0
38        at IceInternal.Selector.setInterrupt(Selector.java:347)
39        at IceInternal.Selector.remove(Selector.java:107)
40        at IceInternal.ThreadPool.finish(ThreadPool.java:183)
41        at Ice.ConnectionI.setState(ConnectionI.java:1454)
42        at Ice.ConnectionI.setState(ConnectionI.java:1351)
43        at Ice.ConnectionI.sendRequest(ConnectionI.java:383)
44        at IceInternal.ConnectionRequestHandler.sendRequest(ConnectionRequestHandler.java:36)
45        at IceInternal.Outgoing.invoke(Outgoing.java:66)
46        at omero.api._IMetadataDelM.loadAnnotations(_IMetadataDelM.java:260)
47        at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:320)
48        at omero.api.IMetadataPrxHelper.loadAnnotations(IMetadataPrxHelper.java:292)
49        at org.openmicroscopy.shoola.env.data.OMEROGateway.loadAnnotations(OMEROGateway.java:2739)
50        at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredAnnotations(OmeroMetadataServiceImpl.java:1022)
51        at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:707)
52        at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:811)
53        at org.openmicroscopy.shoola.env.data.views.calls.StructuredAnnotationLoader$6.doCall(StructuredAnnotationLoader.java:211)
54        at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144)
55        at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226)
56        at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126)
57        at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165)
58        at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276)
59        at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91)
60        at java.lang.Thread.run(Thread.java:680)
61Caused by: java.nio.channels.ClosedByInterruptException
62        at java.nio.channels.spi.AbstractInterruptibleChannel.end(AbstractInterruptibleChannel.java:184)
63        at sun.nio.ch.SinkChannelImpl.write(SinkChannelImpl.java:153)
64        at IceInternal.Selector.setInterrupt(Selector.java:343)
65        ... 22 more
66Exception in thread "Thread-632"
67
682013-01-10 10:58:28,621 WARN  [                 ome.system.UpgradeCheck] (nitializer) UPGRADE AVAILABLE:Please upgrade to 4.4.5 See http://trac.openmicroscopy.org.uk/omero for the latest version
692013-01-10 10:58:28,706 INFO  [opy.shoola.env.rnd.PixelsServicesFactory] (nitializer) Heap memory usage: max 1060372480
702013-01-10 10:58:28,717 INFO  [enmicroscopy.shoola.env.init.TaskBarInit] (nitializer) Loaded L&F: com.apple.laf.AquaLookAndFeel
712013-01-10 10:58:32,933 INFO  [copy.shoola.env.data.DataServicesFactory] (nitializer) Server version: 4.4.4
72Client version: 4.4.4-766-7e18246-dirty-ice33-b111
73os_name: Mac OS X
74os_arch: x86_64
75java_version: 1.6.0_37
76os_version: 10.6.8

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