Task #9712 (closed)
Opened 12 years ago
Closed 12 years ago
Bug: Amira: Tile mis-registration in xy using FS
| Reported by: | rleigh | Owned by: | mlinkert |
|---|---|---|---|
| Priority: | critical | Milestone: | OMERO-4.4.7 |
| Component: | Insight | Version: | n.a. |
| Keywords: | n.a. | Cc: | jburel |
| Resources: | n.a. | Referenced By: | n.a. |
| References: | n.a. | Remaining Time: | n.a. |
| Sprint: | n.a. |
Description
See attached image.
File: est_images_good/amira/Virus_Membrane7.am
Moving the z position shows some tiles aligned correctly, but others are misregistered in the x dimension.
Attachments (1)
Change History (3)
Changed 12 years ago by rleigh
comment:1 Changed 12 years ago by mlinkert
- Cc jburel added; mlinkert-x removed
- Owner changed from jburel to mlinkert-x
comment:2 Changed 12 years ago by mlinkert
- Resolution set to fixed
- Status changed from new to closed
Fixed with: https://github.com/melissalinkert/bioformats/commit/8e8220c4455ce0ff31a8a70f4c4a7f2ad53b281d
The problem is also reproducible using:
showinf -range 254 254 Virus_Membrane7.am
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You may also have a look at Agilo extensions to the ticket.
Likely an issue of the offsets being wrong when the planes aren't read exactly in sequential order, similar to #9714.