Task #8588 (closed)
Opened 12 years ago
Closed 12 years ago
BUG:Feedback 4286. ZeissCZIReader
Reported by: | omero-qa | Owned by: | mlinkert |
---|---|---|---|
Priority: | minor | Milestone: | Unscheduled |
Component: | from QA | Version: | n.a. |
Keywords: | n.a. | Cc: | |
Resources: | n.a. | Referenced By: | n.a. |
References: | n.a. | Remaining Time: | n.a. |
Sprint: | n.a. |
Description
http://qa.openmicroscopy.org.uk/qa/feedback/4286/
Comment from JM:
Problem might have already been fixed. I create a ticket just in case.
java.lang.NullPointerException at loci.formats.in.ZeissCZIReader.translateExperiment(ZeissCZIReader.java:1250) at loci.formats.in.ZeissCZIReader.translateMetadata(ZeissCZIReader.java:662) at loci.formats.in.ZeissCZIReader.initFile(ZeissCZIReader.java:372) at loci.formats.FormatReader.setId(FormatReader.java:1087) at loci.formats.ImageReader.setId(ImageReader.java:682) at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:492) at loci.formats.ChannelFiller.setId(ChannelFiller.java:249) at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:492) at loci.formats.ChannelSeparator.setId(ChannelSeparator.java:257) at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:492) at ome.formats.importer.ImportLibrary.open(ImportLibrary.java:310) at ome.formats.importer.ImportLibrary.importImage(ImportLibrary.java:486) at org.openmicroscopy.shoola.env.data.OMEROGateway.importImage(OMEROGateway.java:6253) at org.openmicroscopy.shoola.env.data.OmeroImageServiceImpl.importFile(OmeroImageServiceImpl.java:1247) at org.openmicroscopy.shoola.env.data.views.calls.ImagesImporter.importFile(ImagesImporter.java:86) at org.openmicroscopy.shoola.env.data.views.calls.ImagesImporter.access$000(ImagesImporter.java:55) at org.openmicroscopy.shoola.env.data.views.calls.ImagesImporter$1.doCall(ImagesImporter.java:113) at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144) at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226) at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165) at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276) at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91) at java.lang.Thread.run(Thread.java:680)
Change History (1)
comment:1 Changed 12 years ago by mlinkert
- Resolution set to fixed
- Status changed from new to closed
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This has already been fixed, and is/was an artifact of the Bio-Formats JARs not having been updated within OMERO.