Task #5739 (closed)
Opened 13 years ago
Closed 13 years ago
BUG: Multiple files on dropbox giving connection issues
| Reported by: | cneves | Owned by: | cblackburn |
|---|---|---|---|
| Priority: | major | Milestone: | OMERO-Beta4.3.2 |
| Component: | OmeroFs | Version: | n.a. |
| Keywords: | n.a. | Cc: | jamoore |
| Resources: | n.a. | Referenced By: | n.a. |
| References: | n.a. | Remaining Time: | 0.0d |
| Sprint: | n.a. |
Description (last modified by jmoore)
This was on my laptop, using latest develop branch server (f9a5f9f118f2c5bd359677fc9bc20e23647b19e4)
All tests on #5621 passed except for the multiple images in a subfolder. Dropbox recognized all images and initiated all imports, but only a few of the images got imported. All the images successfully imported individually.
Dropbox log below.
Attachments (2)
Change History (21)
comment:1 Changed 13 years ago by cneves
- Summary changed from Multiple DV files on dropbox giving connection issues to BUG: Multiple DV files on dropbox giving connection issues
comment:2 Changed 13 years ago by jmoore
- Description modified (diff)
comment:3 Changed 13 years ago by jmoore
- Cc jmoore added
- Component changed from General to OmeroFs
- Owner set to cblackburn
comment:4 Changed 13 years ago by cblackburn
I have not been able to reproduce this on Mac OS 10.5
Is it reproducible on your system, Carlos?
comment:5 Changed 13 years ago by jmoore
- Milestone changed from OMERO-Beta4.3 to OMERO-Beta4.3.1
Moving to 4.3.1 for handling
comment:6 Changed 13 years ago by cneves
- Resolution set to fixed
- Status changed from new to closed
Tested again against latest develop (d800b25f9a163190baa939579408e01699e4a52b) and it is working fine, can't reproduce it anymore. Since Colin also reported not being able to reproduce, I'm closing it.
comment:7 Changed 13 years ago by cblackburn
- Resolution fixed deleted
- Status changed from closed to reopened
- Summary changed from BUG: Multiple DV files on dropbox giving connection issues to BUG: Multiple files on dropbox giving connection issues
This bug has now been reproduced by Chris Wood but with lsm files. See attached log.
Changed 13 years ago by cblackburn
comment:8 Changed 13 years ago by cblackburn
- Milestone changed from OMERO-Beta4.3.1 to OMERO-Beta4.3.2
- Sprint 2011-07-07 (1) deleted
Changed 13 years ago by cblackburn
comment:9 Changed 13 years ago by cblackburn
- Cc cblackburn added; jmoore removed
- Owner changed from cblackburn to jmoore
- Sprint set to 2011-07-21 (1)
- Status changed from reopened to accepted
comment:10 Changed 13 years ago by jmoore
- Remaining Time set to 0.25
Push to team/bug/5739. Primary change:
@@ -571,6 +592,7 @@ class MonitorClientI(monitors.MonitorClient):
return
try:
+ self.state.appropriateWait() # See ticket:5739
self.log.info("Importing %s (session=%s)", fileName, key)
imageId = []
in import file, which adds a few second pause if another import just started. This is just a hunch.
comment:11 Changed 13 years ago by jmoore
- Sprint changed from 2011-07-21 (1) to 2011-08-04 (2)
comment:12 Changed 13 years ago by jmoore
Note: the above timing change had some effect. Of two attempts, one had fewer failures than previously, and the other had no failures.
comment:13 Changed 13 years ago by jmoore
- Owner jmoore deleted
- Status changed from accepted to new
comment:14 Changed 13 years ago by jmoore
- Owner set to jmoore
comment:15 Changed 13 years ago by jmoore
- Cc jmoore added; cblackburn removed
- Owner changed from jmoore to cblackburn
- Sprint 2011-08-04 (2) deleted
Colin, I've pushed a few changes to make the default 5 seconds and have it configurable. Can you re-test and if this looks ok, do and/or ticket whatever needs to "make this official" (e.g. documentation on plone, etc.)
comment:16 Changed 13 years ago by Colin Blackburn <C.Blackburn@…>
(In [53f6f31956abe266c0a9a91a73bac4822ccd0234/ome.git] on branch develop) Add MonitorState.appropriateWait before import (See #5739)
comment:17 Changed 13 years ago by Colin Blackburn <C.Blackburn@…>
(In [bfff5a1fc925ac12d2cc7ddf9cac30272a4d6cd7/ome.git] on branch develop) Configurable 'throttleImport' with a default of 5 seconds (See #5739)
comment:18 Changed 13 years ago by Colin Blackburn <C.Blackburn@…>
(In [097f3bdc61e0427bf03a4d3db98bf7b69ac4822b/ome.git] on branch develop) Setting 'throttleImport' default to 10 seconds (See #5739)
comment:19 Changed 13 years ago by cblackburn
- Remaining Time changed from 0.25 to 0
- Resolution set to fixed
- Status changed from new to closed
This change needs to be documented at https://www.openmicroscopy.org/site/support/omero4/server/fs before release.
2011-06-01 03:29:18,796 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-3 ) Processing 11 events (10 ids). 1 remaining 2011-06-01 03:29:18,796 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-3 ) Getting filesets on : set(['/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/lung-lentiCMtriple-4_R3D.dv', '/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/test11_R3D.dv', '/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/CFPNEAT01_R3D.dv', '/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/mt1_R3D_D3D.dv', '/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/off_by_1_a.dv', '/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/very_small.d3d.dv', '/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/IAGFP-Noc01_R3D.dv.log', '/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/mt1_R3D_D3D_log.txt', '/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/IAGFP-Noc01_R3D.dv', '/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/CFPNEAT01_R3D.dv.log']) 2011-06-01 03:29:20,976 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-3 ) EVENT_RECORD::Cookie::1306895360.98::Filesets::{'/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/lung-lentiCMtriple-4_R3D.dv': ['/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/lung-lentiCMtriple-4_R3D.dv'], '/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/test11_R3D.dv': ['/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/test11_R3D.dv'], '/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/CFPNEAT01_R3D.dv': ['/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/CFPNEAT01_R3D.dv', '/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/CFPNEAT01_R3D.dv.log'], '/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/mt1_R3D_D3D.dv': ['/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/mt1_R3D_D3D.dv', '/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/mt1_R3D_D3D_log.txt'], '/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/off_by_1_a.dv': ['/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/off_by_1_a.dv'], '/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/very_small.d3d.dv': ['/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/very_small.d3d.dv'], '/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/IAGFP-Noc01_R3D.dv': ['/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/IAGFP-Noc01_R3D.dv', '/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/IAGFP-Noc01_R3D.dv.log']} 2011-06-01 03:29:20,978 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-3 ) New entry /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/lung-lentiCMtriple-4_R3D.dv contains 1 file(s). Files=1 Timers=1 2011-06-01 03:29:20,979 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-3 ) New entry /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/test11_R3D.dv contains 1 file(s). Files=2 Timers=2 2011-06-01 03:29:20,979 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-3 ) New entry /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/CFPNEAT01_R3D.dv contains 2 file(s). Files=4 Timers=3 2011-06-01 03:29:20,980 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-3 ) New entry /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/mt1_R3D_D3D.dv contains 2 file(s). Files=6 Timers=4 2011-06-01 03:29:20,981 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-3 ) New entry /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/off_by_1_a.dv contains 1 file(s). Files=7 Timers=5 2011-06-01 03:29:20,981 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-3 ) New entry /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/very_small.d3d.dv contains 1 file(s). Files=8 Timers=6 2011-06-01 03:29:20,982 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-3 ) New entry /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/IAGFP-Noc01_R3D.dv contains 2 file(s). Files=10 Timers=7 2011-06-01 03:30:20,979 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-47 ) Removed key /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/lung-lentiCMtriple-4_R3D.dv 2011-06-01 03:30:20,980 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) Removed key /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/test11_R3D.dv 2011-06-01 03:30:20,981 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) Removed key /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/CFPNEAT01_R3D.dv 2011-06-01 03:30:20,982 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) Removed key /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/off_by_1_a.dv 2011-06-01 03:30:20,983 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) Removed key /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/very_small.d3d.dv 2011-06-01 03:30:20,984 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) Removed key /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/mt1_R3D_D3D.dv 2011-06-01 03:30:20,985 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) Removed key /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/IAGFP-Noc01_R3D.dv 2011-06-01 03:30:20,989 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-3 ) Processing 1 events (1 ids). 0 remaining 2011-06-01 03:30:20,990 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-3 ) Getting filesets on : set(['/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/test11_R3D.dv']) 2011-06-01 03:30:21,582 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) Importing /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/IAGFP-Noc01_R3D.dv (session=0cc6e97c-ca0f-41a3-9a2f-48fdfe9a7c73) 2011-06-01 03:30:21,593 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) Importing /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/mt1_R3D_D3D.dv (session=f0b03e79-6d87-4af9-ae1a-78561e01d8bd) 2011-06-01 03:30:21,759 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) Importing /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/test11_R3D.dv (session=c891f2a5-2172-4c04-a313-4d30c689a0e8) 2011-06-01 03:30:21,812 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-47 ) Importing /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/lung-lentiCMtriple-4_R3D.dv (session=13ba99d5-2644-40e8-9e76-5a6b3fbf1a18) 2011-06-01 03:30:21,815 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) Importing /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/CFPNEAT01_R3D.dv (session=6885a811-04c2-4450-a663-9ae0b1afff0c) 2011-06-01 03:30:21,818 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) Importing /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/very_small.d3d.dv (session=6a011139-1f89-4418-8e09-ca5a06b6cc9c) 2011-06-01 03:30:21,820 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) Importing /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/off_by_1_a.dv (session=0fd6c07b-6bd8-4f8b-a623-9e4040792e33) 2011-06-01 03:30:22,835 INFO [ omero.util.Resources] (Thread-54 ) Starting 2011-06-01 03:30:22,841 INFO [ omero.util.Resources] (Thread-55 ) Starting 2011-06-01 03:30:22,845 INFO [ omero.util.Resources] (Thread-56 ) Starting 2011-06-01 03:30:22,857 INFO [ omero.util.Resources] (Thread-57 ) Starting 2011-06-01 03:30:22,895 INFO [ omero.util.Resources] (Thread-58 ) Starting 2011-06-01 03:30:22,898 WARNI [ stderr] (Thread-53 ) Joined session 0cc6e97c-ca0f-41a3-9a2f-48fdfe9a7c73 (root@localhost:4064). Idle timeout: 10.0 min. Current group: system 2011-06-01 03:30:22,949 WARNI [ stderr] (Thread-50 ) Joined session f0b03e79-6d87-4af9-ae1a-78561e01d8bd (root@localhost:4064). Idle timeout: 10.0 min. Current group: system 2011-06-01 03:30:22,958 WARNI [ stderr] (Thread-49 ) Joined session 6885a811-04c2-4450-a663-9ae0b1afff0c (root@localhost:4064). Idle timeout: 10.0 min. Current group: system 2011-06-01 03:30:22,997 INFO [ omero.util.Resources] (Thread-59 ) Starting 2011-06-01 03:30:23,011 INFO [ omero.util.Resources] (Thread-60 ) Starting 2011-06-01 03:30:23,014 WARNI [ stderr] (Thread-51 ) Joined session 0fd6c07b-6bd8-4f8b-a623-9e4040792e33 (root@localhost:4064). Idle timeout: 10.0 min. Current group: system 2011-06-01 03:30:23,073 WARNI [ stderr] (Thread-47 ) Joined session 13ba99d5-2644-40e8-9e76-5a6b3fbf1a18 (root@localhost:4064). Idle timeout: 10.0 min. Current group: system 2011-06-01 03:30:23,076 WARNI [ stderr] (Thread-52 ) Joined session 6a011139-1f89-4418-8e09-ca5a06b6cc9c (root@localhost:4064). Idle timeout: 10.0 min. Current group: system 2011-06-01 03:30:23,112 WARNI [ stderr] (Thread-48 ) Joined session c891f2a5-2172-4c04-a313-4d30c689a0e8 (root@localhost:4064). Idle timeout: 10.0 min. Current group: system 2011-06-01 03:30:26,259 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-3 ) EVENT_RECORD::Cookie::1306895426.26::Filesets::{'/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/test11_R3D.dv': ['/Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/test11_R3D.dv']} 2011-06-01 03:30:26,275 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-3 ) New entry /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/test11_R3D.dv contains 1 file(s). Files=1 Timers=1 2011-06-01 03:30:44,077 INFO [ omero.util.Resources] (Thread-55 ) Halted 2011-06-01 03:30:44,102 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) Import of /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/off_by_1_a.dv failed=2 (session=0fd6c07b-6bd8-4f8b-a623-9e4040792e33) 2011-06-01 03:30:44,103 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) ***** start of output from importer-cli to stderr ***** 2011-06-01 03:30:44,103 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) 2011-06-01 03:30:25,608 0 [ main] INFO ome.formats.importer.ImportConfig - OMERO Version: 4.3.0-DEV 2011-06-01 03:30:44,104 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) 2011-06-01 03:30:25,634 26 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 4.3-DEV revision: a9f3138 date: 30 May 2011 2011-06-01 03:30:44,104 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) 2011-06-01 03:30:25,667 59 [ main] INFO formats.importer.cli.CommandLineImporter - Log levels -- Bio-Formats: ERROR OMERO.importer: INFO 2011-06-01 03:30:44,104 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) 2011-06-01 03:30:26,935 1327 [ main] INFO ome.formats.importer.ImportCandidates - Depth: 4 Metadata Level: MINIMUM 2011-06-01 03:30:44,104 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) 2011-06-01 03:30:35,496 9888 [ main] INFO ome.formats.importer.ImportCandidates - 1 file(s) parsed into 1 group(s) with 1 call(s) to setId in 8556ms. (8561ms total) [0 unknowns] 2011-06-01 03:30:44,104 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) 2011-06-01 03:30:36,002 10394 [ main] INFO ome.formats.OMEROMetadataStoreClient - Attempting initial SSL connection to localhost:4064 2011-06-01 03:30:44,105 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) 2011-06-01 03:30:42,921 17313 [ main] ERROR formats.importer.cli.CommandLineImporter - Error during import process. 2011-06-01 03:30:44,105 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) Ice.ConnectionLostException 2011-06-01 03:30:44,105 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) error = 0 2011-06-01 03:30:44,105 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) at IceSSL.TransceiverI.readNonBlocking(TransceiverI.java:706) 2011-06-01 03:30:44,106 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) at IceSSL.TransceiverI.handshakeNonBlocking(TransceiverI.java:394) 2011-06-01 03:30:44,106 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) at IceSSL.TransceiverI.initialize(TransceiverI.java:43) 2011-06-01 03:30:44,106 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) at Ice.ConnectionI.initialize(ConnectionI.java:1536) 2011-06-01 03:30:44,106 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) at Ice.ConnectionI.socketReady(ConnectionI.java:1116) 2011-06-01 03:30:44,106 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) at Ice.ConnectionI$SocketReadyCallback.socketReady(ConnectionI.java:2299) 2011-06-01 03:30:44,107 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) at IceInternal.SelectorThread.run(SelectorThread.java:203) 2011-06-01 03:30:44,107 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) at IceInternal.SelectorThread$HelperThread.run(SelectorThread.java:273) 2011-06-01 03:30:44,107 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) Caused by: java.io.IOException: Connection reset by peer 2011-06-01 03:30:44,107 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) at sun.nio.ch.FileDispatcher.read0(Native Method) 2011-06-01 03:30:44,107 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) at sun.nio.ch.SocketDispatcher.read(SocketDispatcher.java:21) 2011-06-01 03:30:44,108 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) at sun.nio.ch.IOUtil.readIntoNativeBuffer(IOUtil.java:202) 2011-06-01 03:30:44,108 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) at sun.nio.ch.IOUtil.read(IOUtil.java:169) 2011-06-01 03:30:44,108 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) at sun.nio.ch.SocketChannelImpl.read(SocketChannelImpl.java:243) 2011-06-01 03:30:44,108 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) at IceSSL.TransceiverI.readNonBlocking(TransceiverI.java:685) 2011-06-01 03:30:44,109 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) ... 7 more 2011-06-01 03:30:44,109 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-51 ) ***** end of output from importer-cli ***** 2011-06-01 03:30:45,620 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) Import of /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/very_small.d3d.dv failed=2 (session=6a011139-1f89-4418-8e09-ca5a06b6cc9c) 2011-06-01 03:30:45,620 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) ***** start of output from importer-cli to stderr ***** 2011-06-01 03:30:45,620 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) 2011-06-01 03:30:25,662 0 [ main] INFO ome.formats.importer.ImportConfig - OMERO Version: 4.3.0-DEV 2011-06-01 03:30:45,621 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) 2011-06-01 03:30:25,691 29 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 4.3-DEV revision: a9f3138 date: 30 May 2011 2011-06-01 03:30:45,621 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) 2011-06-01 03:30:25,715 53 [ main] INFO formats.importer.cli.CommandLineImporter - Log levels -- Bio-Formats: ERROR OMERO.importer: INFO 2011-06-01 03:30:45,621 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) 2011-06-01 03:30:27,032 1370 [ main] INFO ome.formats.importer.ImportCandidates - Depth: 4 Metadata Level: MINIMUM 2011-06-01 03:30:45,621 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) 2011-06-01 03:30:35,807 10145 [ main] INFO ome.formats.importer.ImportCandidates - 1 file(s) parsed into 1 group(s) with 1 call(s) to setId in 8770ms. (8775ms total) [0 unknowns] 2011-06-01 03:30:45,621 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) 2011-06-01 03:30:36,219 10557 [ main] INFO ome.formats.OMEROMetadataStoreClient - Attempting initial SSL connection to localhost:4064 2011-06-01 03:30:45,622 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) 2011-06-01 03:30:45,342 19680 [ main] ERROR formats.importer.cli.CommandLineImporter - Error during import process. 2011-06-01 03:30:45,622 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) Ice.ConnectionLostException 2011-06-01 03:30:45,622 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) error = 0 2011-06-01 03:30:45,622 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) at IceSSL.TransceiverI.readNonBlocking(TransceiverI.java:706) 2011-06-01 03:30:45,622 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) at IceSSL.TransceiverI.handshakeNonBlocking(TransceiverI.java:394) 2011-06-01 03:30:45,623 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) at IceSSL.TransceiverI.initialize(TransceiverI.java:43) 2011-06-01 03:30:45,623 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) at Ice.ConnectionI.initialize(ConnectionI.java:1536) 2011-06-01 03:30:45,623 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) at Ice.ConnectionI.socketReady(ConnectionI.java:1116) 2011-06-01 03:30:45,623 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) at Ice.ConnectionI$SocketReadyCallback.socketReady(ConnectionI.java:2299) 2011-06-01 03:30:45,623 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) at IceInternal.SelectorThread.run(SelectorThread.java:203) 2011-06-01 03:30:45,624 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) at IceInternal.SelectorThread$HelperThread.run(SelectorThread.java:273) 2011-06-01 03:30:45,624 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) Caused by: java.io.IOException: Connection reset by peer 2011-06-01 03:30:45,625 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) at sun.nio.ch.FileDispatcher.read0(Native Method) 2011-06-01 03:30:45,625 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) at sun.nio.ch.SocketDispatcher.read(SocketDispatcher.java:21) 2011-06-01 03:30:45,625 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) at sun.nio.ch.IOUtil.readIntoNativeBuffer(IOUtil.java:202) 2011-06-01 03:30:45,625 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) at sun.nio.ch.IOUtil.read(IOUtil.java:169) 2011-06-01 03:30:45,626 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) at sun.nio.ch.SocketChannelImpl.read(SocketChannelImpl.java:243) 2011-06-01 03:30:45,626 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) at IceSSL.TransceiverI.readNonBlocking(TransceiverI.java:685) 2011-06-01 03:30:45,626 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) ... 7 more 2011-06-01 03:30:45,626 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-52 ) ***** end of output from importer-cli ***** 2011-06-01 03:30:45,630 INFO [ omero.util.Resources] (Thread-59 ) Halted 2011-06-01 03:30:45,931 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) Import of /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/CFPNEAT01_R3D.dv failed=2 (session=6885a811-04c2-4450-a663-9ae0b1afff0c) 2011-06-01 03:30:45,931 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) ***** start of output from importer-cli to stderr ***** 2011-06-01 03:30:45,931 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) 2011-06-01 03:30:25,627 0 [ main] INFO ome.formats.importer.ImportConfig - OMERO Version: 4.3.0-DEV 2011-06-01 03:30:45,932 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) 2011-06-01 03:30:25,643 16 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 4.3-DEV revision: a9f3138 date: 30 May 2011 2011-06-01 03:30:45,934 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) 2011-06-01 03:30:25,684 57 [ main] INFO formats.importer.cli.CommandLineImporter - Log levels -- Bio-Formats: ERROR OMERO.importer: INFO 2011-06-01 03:30:45,934 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) 2011-06-01 03:30:27,023 1396 [ main] INFO ome.formats.importer.ImportCandidates - Depth: 4 Metadata Level: MINIMUM 2011-06-01 03:30:45,934 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) 2011-06-01 03:30:36,130 10503 [ main] INFO ome.formats.importer.ImportCandidates - 1 file(s) parsed into 1 group(s) with 1 call(s) to setId in 9086ms. (9107ms total) [0 unknowns] 2011-06-01 03:30:45,934 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) 2011-06-01 03:30:36,560 10933 [ main] INFO ome.formats.OMEROMetadataStoreClient - Attempting initial SSL connection to localhost:4064 2011-06-01 03:30:45,935 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) 2011-06-01 03:30:45,825 20198 [ main] ERROR formats.importer.cli.CommandLineImporter - Error during import process. 2011-06-01 03:30:45,935 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) Ice.ConnectionLostException 2011-06-01 03:30:45,935 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) error = 0 2011-06-01 03:30:45,935 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) at IceSSL.TransceiverI.readNonBlocking(TransceiverI.java:706) 2011-06-01 03:30:45,935 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) at IceSSL.TransceiverI.handshakeNonBlocking(TransceiverI.java:394) 2011-06-01 03:30:45,936 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) at IceSSL.TransceiverI.initialize(TransceiverI.java:43) 2011-06-01 03:30:45,936 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) at Ice.ConnectionI.initialize(ConnectionI.java:1536) 2011-06-01 03:30:45,936 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) at Ice.ConnectionI.socketReady(ConnectionI.java:1116) 2011-06-01 03:30:45,936 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) at Ice.ConnectionI$SocketReadyCallback.socketReady(ConnectionI.java:2299) 2011-06-01 03:30:45,936 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) at IceInternal.SelectorThread.run(SelectorThread.java:203) 2011-06-01 03:30:45,936 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) at IceInternal.SelectorThread$HelperThread.run(SelectorThread.java:273) 2011-06-01 03:30:45,937 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) Caused by: java.io.IOException: Connection reset by peer 2011-06-01 03:30:45,937 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) at sun.nio.ch.FileDispatcher.read0(Native Method) 2011-06-01 03:30:45,937 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) at sun.nio.ch.SocketDispatcher.read(SocketDispatcher.java:21) 2011-06-01 03:30:45,937 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) at sun.nio.ch.IOUtil.readIntoNativeBuffer(IOUtil.java:202) 2011-06-01 03:30:45,937 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) at sun.nio.ch.IOUtil.read(IOUtil.java:169) 2011-06-01 03:30:45,937 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) at sun.nio.ch.SocketChannelImpl.read(SocketChannelImpl.java:243) 2011-06-01 03:30:45,938 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) at IceSSL.TransceiverI.readNonBlocking(TransceiverI.java:685) 2011-06-01 03:30:45,938 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) ... 7 more 2011-06-01 03:30:45,938 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-49 ) ***** end of output from importer-cli ***** 2011-06-01 03:30:45,967 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) Import of /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/mt1_R3D_D3D.dv failed=2 (session=f0b03e79-6d87-4af9-ae1a-78561e01d8bd) 2011-06-01 03:30:45,967 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) ***** start of output from importer-cli to stderr ***** 2011-06-01 03:30:45,967 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) 2011-06-01 03:30:25,623 0 [ main] INFO ome.formats.importer.ImportConfig - OMERO Version: 4.3.0-DEV 2011-06-01 03:30:45,967 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) 2011-06-01 03:30:25,642 19 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 4.3-DEV revision: a9f3138 date: 30 May 2011 2011-06-01 03:30:45,968 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) 2011-06-01 03:30:25,675 52 [ main] INFO formats.importer.cli.CommandLineImporter - Log levels -- Bio-Formats: ERROR OMERO.importer: INFO 2011-06-01 03:30:45,968 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) 2011-06-01 03:30:27,003 1380 [ main] INFO ome.formats.importer.ImportCandidates - Depth: 4 Metadata Level: MINIMUM 2011-06-01 03:30:45,968 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) 2011-06-01 03:30:35,800 10177 [ main] INFO ome.formats.importer.ImportCandidates - 1 file(s) parsed into 1 group(s) with 1 call(s) to setId in 8726ms. (8796ms total) [0 unknowns] 2011-06-01 03:30:45,968 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) 2011-06-01 03:30:36,304 10681 [ main] INFO ome.formats.OMEROMetadataStoreClient - Attempting initial SSL connection to localhost:4064 2011-06-01 03:30:45,968 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) 2011-06-01 03:30:45,843 20220 [ main] ERROR formats.importer.cli.CommandLineImporter - Error during import process. 2011-06-01 03:30:45,969 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) Ice.ConnectionLostException 2011-06-01 03:30:45,969 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) error = 0 2011-06-01 03:30:45,969 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) at IceSSL.TransceiverI.readNonBlocking(TransceiverI.java:706) 2011-06-01 03:30:45,969 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) at IceSSL.TransceiverI.handshakeNonBlocking(TransceiverI.java:394) 2011-06-01 03:30:45,969 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) at IceSSL.TransceiverI.initialize(TransceiverI.java:43) 2011-06-01 03:30:45,970 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) at Ice.ConnectionI.initialize(ConnectionI.java:1536) 2011-06-01 03:30:45,970 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) at Ice.ConnectionI.socketReady(ConnectionI.java:1116) 2011-06-01 03:30:45,970 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) at Ice.ConnectionI$SocketReadyCallback.socketReady(ConnectionI.java:2299) 2011-06-01 03:30:45,970 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) at IceInternal.SelectorThread.run(SelectorThread.java:203) 2011-06-01 03:30:45,970 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) at IceInternal.SelectorThread$HelperThread.run(SelectorThread.java:273) 2011-06-01 03:30:45,971 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) Caused by: java.io.IOException: Connection reset by peer 2011-06-01 03:30:45,971 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) at sun.nio.ch.FileDispatcher.read0(Native Method) 2011-06-01 03:30:45,971 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) at sun.nio.ch.SocketDispatcher.read(SocketDispatcher.java:21) 2011-06-01 03:30:45,972 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) at sun.nio.ch.IOUtil.readIntoNativeBuffer(IOUtil.java:202) 2011-06-01 03:30:45,972 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) at sun.nio.ch.IOUtil.read(IOUtil.java:169) 2011-06-01 03:30:45,972 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) at sun.nio.ch.SocketChannelImpl.read(SocketChannelImpl.java:243) 2011-06-01 03:30:45,972 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) at IceSSL.TransceiverI.readNonBlocking(TransceiverI.java:685) 2011-06-01 03:30:45,972 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) ... 7 more 2011-06-01 03:30:45,973 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-50 ) ***** end of output from importer-cli ***** 2011-06-01 03:30:45,974 INFO [ omero.util.Resources] (Thread-57 ) Halted 2011-06-01 03:30:45,981 INFO [ omero.util.Resources] (Thread-56 ) Halted 2011-06-01 03:30:45,998 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) Import of /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/test11_R3D.dv failed=2 (session=c891f2a5-2172-4c04-a313-4d30c689a0e8) 2011-06-01 03:30:45,998 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) ***** start of output from importer-cli to stderr ***** 2011-06-01 03:30:45,999 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) 2011-06-01 03:30:25,689 0 [ main] INFO ome.formats.importer.ImportConfig - OMERO Version: 4.3.0-DEV 2011-06-01 03:30:45,999 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) 2011-06-01 03:30:25,727 38 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 4.3-DEV revision: a9f3138 date: 30 May 2011 2011-06-01 03:30:45,999 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) 2011-06-01 03:30:25,778 89 [ main] INFO formats.importer.cli.CommandLineImporter - Log levels -- Bio-Formats: ERROR OMERO.importer: INFO 2011-06-01 03:30:45,999 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) 2011-06-01 03:30:27,028 1339 [ main] INFO ome.formats.importer.ImportCandidates - Depth: 4 Metadata Level: MINIMUM 2011-06-01 03:30:45,999 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) 2011-06-01 03:30:35,758 10069 [ main] INFO ome.formats.importer.ImportCandidates - 1 file(s) parsed into 1 group(s) with 1 call(s) to setId in 8698ms. (8731ms total) [0 unknowns] 2011-06-01 03:30:46,000 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) 2011-06-01 03:30:36,283 10594 [ main] INFO ome.formats.OMEROMetadataStoreClient - Attempting initial SSL connection to localhost:4064 2011-06-01 03:30:46,000 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) 2011-06-01 03:30:45,880 20191 [ main] ERROR formats.importer.cli.CommandLineImporter - Error during import process. 2011-06-01 03:30:46,000 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) Ice.ConnectionLostException 2011-06-01 03:30:46,000 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) error = 0 2011-06-01 03:30:46,000 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) at IceSSL.TransceiverI.readNonBlocking(TransceiverI.java:706) 2011-06-01 03:30:46,000 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) at IceSSL.TransceiverI.handshakeNonBlocking(TransceiverI.java:394) 2011-06-01 03:30:46,001 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) at IceSSL.TransceiverI.initialize(TransceiverI.java:43) 2011-06-01 03:30:46,001 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) at Ice.ConnectionI.initialize(ConnectionI.java:1536) 2011-06-01 03:30:46,001 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) at Ice.ConnectionI.socketReady(ConnectionI.java:1116) 2011-06-01 03:30:46,001 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) at Ice.ConnectionI$SocketReadyCallback.socketReady(ConnectionI.java:2299) 2011-06-01 03:30:46,001 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) at IceInternal.SelectorThread.run(SelectorThread.java:203) 2011-06-01 03:30:46,002 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) at IceInternal.SelectorThread$HelperThread.run(SelectorThread.java:273) 2011-06-01 03:30:46,002 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) Caused by: java.io.IOException: Connection reset by peer 2011-06-01 03:30:46,002 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) at sun.nio.ch.FileDispatcher.read0(Native Method) 2011-06-01 03:30:46,002 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) at sun.nio.ch.SocketDispatcher.read(SocketDispatcher.java:21) 2011-06-01 03:30:46,002 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) at sun.nio.ch.IOUtil.readIntoNativeBuffer(IOUtil.java:202) 2011-06-01 03:30:46,002 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) at sun.nio.ch.IOUtil.read(IOUtil.java:169) 2011-06-01 03:30:46,003 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) at sun.nio.ch.SocketChannelImpl.read(SocketChannelImpl.java:243) 2011-06-01 03:30:46,003 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) at IceSSL.TransceiverI.readNonBlocking(TransceiverI.java:685) 2011-06-01 03:30:46,003 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) ... 7 more 2011-06-01 03:30:46,003 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-48 ) ***** end of output from importer-cli ***** 2011-06-01 03:30:46,036 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) Import of /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/IAGFP-Noc01_R3D.dv failed=2 (session=0cc6e97c-ca0f-41a3-9a2f-48fdfe9a7c73) 2011-06-01 03:30:46,036 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) ***** start of output from importer-cli to stderr ***** 2011-06-01 03:30:46,036 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) 2011-06-01 03:30:25,490 0 [ main] INFO ome.formats.importer.ImportConfig - OMERO Version: 4.3.0-DEV 2011-06-01 03:30:46,037 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) 2011-06-01 03:30:25,498 8 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 4.3-DEV revision: a9f3138 date: 30 May 2011 2011-06-01 03:30:46,037 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) 2011-06-01 03:30:25,555 65 [ main] INFO formats.importer.cli.CommandLineImporter - Log levels -- Bio-Formats: ERROR OMERO.importer: INFO 2011-06-01 03:30:46,037 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) 2011-06-01 03:30:26,831 1341 [ main] INFO ome.formats.importer.ImportCandidates - Depth: 4 Metadata Level: MINIMUM 2011-06-01 03:30:46,037 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) 2011-06-01 03:30:35,613 10123 [ main] INFO ome.formats.importer.ImportCandidates - 1 file(s) parsed into 1 group(s) with 1 call(s) to setId in 8751ms. (8781ms total) [0 unknowns] 2011-06-01 03:30:46,037 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) 2011-06-01 03:30:36,101 10611 [ main] INFO ome.formats.OMEROMetadataStoreClient - Attempting initial SSL connection to localhost:4064 2011-06-01 03:30:46,038 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) 2011-06-01 03:30:45,964 20474 [ main] ERROR formats.importer.cli.CommandLineImporter - Error during import process. 2011-06-01 03:30:46,038 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) Ice.ConnectionLostException 2011-06-01 03:30:46,038 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) error = 0 2011-06-01 03:30:46,038 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) at IceSSL.TransceiverI.readNonBlocking(TransceiverI.java:706) 2011-06-01 03:30:46,038 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) at IceSSL.TransceiverI.handshakeNonBlocking(TransceiverI.java:394) 2011-06-01 03:30:46,039 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) at IceSSL.TransceiverI.initialize(TransceiverI.java:43) 2011-06-01 03:30:46,039 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) at Ice.ConnectionI.initialize(ConnectionI.java:1536) 2011-06-01 03:30:46,039 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) at Ice.ConnectionI.socketReady(ConnectionI.java:1116) 2011-06-01 03:30:46,039 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) at Ice.ConnectionI$SocketReadyCallback.socketReady(ConnectionI.java:2299) 2011-06-01 03:30:46,039 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) at IceInternal.SelectorThread.run(SelectorThread.java:203) 2011-06-01 03:30:46,039 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) at IceInternal.SelectorThread$HelperThread.run(SelectorThread.java:273) 2011-06-01 03:30:46,040 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) Caused by: java.io.IOException: Connection reset by peer 2011-06-01 03:30:46,040 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) at sun.nio.ch.FileDispatcher.read0(Native Method) 2011-06-01 03:30:46,040 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) at sun.nio.ch.SocketDispatcher.read(SocketDispatcher.java:21) 2011-06-01 03:30:46,040 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) at sun.nio.ch.IOUtil.readIntoNativeBuffer(IOUtil.java:202) 2011-06-01 03:30:46,040 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) at sun.nio.ch.IOUtil.read(IOUtil.java:169) 2011-06-01 03:30:46,040 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) at sun.nio.ch.SocketChannelImpl.read(SocketChannelImpl.java:243) 2011-06-01 03:30:46,040 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) at IceSSL.TransceiverI.readNonBlocking(TransceiverI.java:685) 2011-06-01 03:30:46,041 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) ... 7 more 2011-06-01 03:30:46,041 ERROR [ fsclient.fsDropBoxMonitorClient] (Thread-53 ) ***** end of output from importer-cli ***** 2011-06-01 03:30:46,041 INFO [ omero.util.Resources] (Thread-60 ) Halted 2011-06-01 03:30:46,043 INFO [ omero.util.Resources] (Thread-54 ) Halted 2011-06-01 03:30:49,221 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-47 ) Import of /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/lung-lentiCMtriple-4_R3D.dv completed (session=13ba99d5-2644-40e8-9e76-5a6b3fbf1a18) 2011-06-01 03:30:49,249 INFO [ omero.util.Resources] (Thread-58 ) Halted 2011-06-01 03:31:26,275 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-61 ) Removed key /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/test11_R3D.dv 2011-06-01 03:31:26,431 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-61 ) Importing /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/test11_R3D.dv (session=70cb7b27-a31f-4134-8e1c-766a9045ab7b) 2011-06-01 03:31:26,686 INFO [ omero.util.Resources] (Thread-62 ) Starting 2011-06-01 03:31:26,701 WARNI [ stderr] (Thread-61 ) Joined session 70cb7b27-a31f-4134-8e1c-766a9045ab7b (root@localhost:4064). Idle timeout: 10.0 min. Current group: system 2011-06-01 03:31:54,573 INFO [ fsclient.fsDropBoxMonitorClient] (Thread-61 ) Import of /Users/cn/work/glencoe/omero/ome2/OMERO/DropBox/root/dv5/test11_R3D.dv completed (session=70cb7b27-a31f-4134-8e1c-766a9045ab7b) 2011-06-01 03:31:54,574 INFO [ omero.util.Resources] (Thread-62 ) Halted