Task #5440 (closed)
Opened 13 years ago
Closed 13 years ago
Bug: Large SVS file -2 resolution level set?
Reported by: | cxallan | Owned by: | atarkowska |
---|---|---|---|
Priority: | blocker | Milestone: | OMERO-Beta4.3 |
Component: | Web | Version: | n.a. |
Keywords: | n.a. | Cc: | wmoore |
Resources: | n.a. | Referenced By: | n.a. |
References: | n.a. | Remaining Time: | 0.0d |
Sprint: | 2011-06-16 (14) |
Description
2011-05-23 13:58:13,580 INFO [ org.perf4j.TimingLogger] (l.Server-1) start[1306155493533] time[47] tag[omero.call.success.ome.services.RenderingBean.getTileSize] 2011-05-23 13:58:13,580 INFO [ ome.services.util.ServiceHandler] (l.Server-1) Rslt: [240, 240] 2011-05-23 13:58:13,581 INFO [ ome.services.util.ServiceHandler] (l.Server-9) Meth: interface omeis.providers.re.RenderingEngine.getResolutionLevel 2011-05-23 13:58:13,581 INFO [ ome.services.util.ServiceHandler] (l.Server-9) Args: () 2011-05-23 13:58:13,581 INFO [ org.perf4j.TimingLogger] (l.Server-9) start[1306155493581] time[0] tag[omero.call.success.ome.services.RenderingBean.getResolutionLevel] 2011-05-23 13:58:13,581 INFO [ ome.services.util.ServiceHandler] (l.Server-9) Rslt: 5 2011-05-23 13:58:13,581 INFO [ ome.services.util.ServiceHandler] (l.Server-2) Meth: interface omeis.providers.re.RenderingEngine.getResolutionLevels 2011-05-23 13:58:13,581 INFO [ ome.services.util.ServiceHandler] (l.Server-2) Args: () 2011-05-23 13:58:13,581 INFO [ org.perf4j.TimingLogger] (l.Server-2) start[1306155493581] time[0] tag[omero.call.success.ome.services.RenderingBean.getResolutionLevels] 2011-05-23 13:58:13,581 INFO [ ome.services.util.ServiceHandler] (l.Server-2) Rslt: 6 2011-05-23 13:58:13,583 INFO [ ome.services.util.ServiceHandler] (l.Server-6) Meth: interface omeis.providers.re.RenderingEngine.setResolutionLevel 2011-05-23 13:58:13,583 INFO [ ome.services.util.ServiceHandler] (l.Server-6) Args: [-2] 2011-05-23 13:58:13,583 INFO [ org.perf4j.TimingLogger] (l.Server-6) start[1306155493583] time[0] tag[omero.call.exception] 2011-05-23 13:58:13,584 WARN [ ome.services.util.ServiceHandler] (l.Server-6) IllegalArgumentException thrown. java.lang.IllegalArgumentException: Invalid series: 7 at loci.formats.FormatReader.setSeries(FormatReader.java:778) at ome.io.bioformats.BfPixelBuffer.setResolutionLevel(BfPixelBuffer.java:496) at ome.io.bioformats.BfPyramidPixelBuffer.setResolutionLevel(BfPyramidPixelBuffer.java:1139) at omeis.providers.re.Renderer.setResolutionLevel(Renderer.java:940) at ome.services.RenderingBean.setResolutionLevel(RenderingBean.java:1418) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:111) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) at $Proxy81.setResolutionLevel(Unknown Source) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307) at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150) at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:83) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:43) at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172) at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202) at $Proxy81.setResolutionLevel(Unknown Source) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179) at ome.services.throttling.Callback.run(Callback.java:56) at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56) at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:136) at ome.services.blitz.impl.AbstractPyramidServant.setResolutionLevel_async(AbstractPyramidServant.java:78) at omero.api._RenderingEngineTie.setResolutionLevel_async(_RenderingEngineTie.java:92) at omero.api._PyramidServiceDisp.___setResolutionLevel(_PyramidServiceDisp.java:199) at omero.api._RenderingEngineDisp.__dispatch(_RenderingEngineDisp.java:1758) at IceInternal.Incoming.invoke(Incoming.java:159) at Ice.ConnectionI.invokeAll(ConnectionI.java:2037) at Ice.ConnectionI.message(ConnectionI.java:972) at IceInternal.ThreadPool.run(ThreadPool.java:577) at IceInternal.ThreadPool.access$100(ThreadPool.java:12) at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971) 2011-05-23 13:58:13,584 INFO [ ome.services.util.ServiceHandler] (l.Server-6) Excp: java.lang.IllegalArgumentException: Invalid series: 7
Change History (6)
comment:1 Changed 13 years ago by atarkowska
- Sprint set to 2011-06-02 (13)
comment:2 Changed 13 years ago by jburel
- Sprint changed from 2011-06-02 (13) to 2011-06-16 (14)
comment:3 Changed 13 years ago by atarkowska
- Status changed from new to accepted
comment:4 Changed 13 years ago by atarkowska
- Remaining Time set to 0.5
comment:5 Changed 13 years ago by Aleksandra Tarkowska <aleksandrat@…>
(In [a5f76ea659b03ea1bfcd4ff5fe7cfcf73dbc4b46/ome.git] on branch develop) better support for non square tiles, close #5224 and prevent to ask for negative zoom level, see #5440
comment:6 Changed 13 years ago by Aleksandra Tarkowska <aleksandrat@…>
- Remaining Time changed from 0.5 to 0
- Resolution set to fixed
- Status changed from accepted to closed
(In [3f241ef82609a9f4ca65ea74576023ae2b689522/ome.git] on branch develop) this fixes negative level request, close #5440
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Moved from sprint 2011-06-02 (13)