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Task #12158 (closed)

Opened 10 years ago

Closed 10 years ago

BUG: Bio-formats remote importer

Reported by: pwalczysko Owned by: mlinkert
Priority: major Milestone: 5.0.2
Component: Bio-Formats Version: 5.0.0
Keywords: n.a. Cc: ux@…, jamoore
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: n.a.

Description

Noticed by @cblackburn during 5.0.1rc1 testing.

This applies to both bioformats_package.jar and loci_tools.jar

Using Bio-Formats Remote Importer the URL http://imagej.nih.gov/ij/images/mri.gif brings up the Import Options dialog but clicking Okay nothing happens, no image appears. The image is definitely there and imports locally into IJ. This is a fragment from the Debug window: Bio-Formats:

loci.plugins.in.MainDialog?: prompt

GUI.getMaxWindowBounds: java.awt.Rectangle[x=4,y=22,width=2556,height=1418]
out> GIFReader initializing http://imagej.nih.gov/ij/images/mri.gif
out> loci.formats.in.GIFReader.initFile(http://imagej.nih.gov/ij/images/mri.gif)
out> Verifying GIF format
out> Reading dimensions
out> Reading data blocks
out> Populating metadata
Bio-Formats: loci.plugins.in.FilePatternDialog: prompt

Then nothing other than a lot of CPU usage (500+ %) by the IJ process

Change History (4)

comment:2 Changed 10 years ago by mlinkert

Colin, did you have the "Group files with similar names" option checked? If so, does it work when that box is unchecked?

So far, checking that box is the only way I've been able to duplicate the problem - the issue is that it's trying to list the files in http://imagej.nih.gov/ij/images/, which is really very slow. Worth fixing, but I don't think this should block 5.0.1 given that it's not a regression.

comment:3 Changed 10 years ago by mlinkert

  • Cc jmoore mlinkert-x mlinkert removed
  • Milestone changed from 5.0.1 to 5.0.2
  • Priority changed from blocker to major

comment:4 Changed 10 years ago by mlinkert

  • Resolution set to fixed
  • Status changed from new to closed
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