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Task #10301 (closed)

Opened 11 years ago

Closed 11 years ago

BUG: State: 3Data Retrieval Failure

Reported by: rkferguson Owned by: jburel
Priority: blocker Milestone: OMERO-4.4.7
Component: Insight Version: n.a.
Keywords: n.a. Cc:
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: 2013-02-12 (5)

Description (last modified by rkferguson)

Testing: howe - Win 7 - OMERO.insight-4.4.5-603-c654df5-dirty-ice33-b142-win

Windows came up with a Java 6 update which I installed to see if would help prevent previous bugs.

Restarted Windows and tried again. Worked OK for a minute - no recurrence of #10298.

Then had another crash with following error message - taken from log not from QA message.

Insight unresponsive.

2013-02-05 12:51:28,312 ERROR [ola.agents.metadata.StructuredDataLoader] (entQueue-0) State: 3Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. 
Cannot retrieve the requested link for the specified children
 at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891)
 at org.openmicroscopy.shoola.env.data.OMEROGateway.findAnnotationLinks(OMEROGateway.java:3641)
 at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:779)
 at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:835)
 at org.openmicroscopy.shoola.env.data.views.calls.StructuredAnnotationLoader$6.doCall(StructuredAnnotationLoader.java:211)
 at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144)
 at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226)
 at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126)
 at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165)
 at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276)
 at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91)
 at java.lang.Thread.run(Unknown Source)
Caused by: Ice.SocketException
    error = 0
 at IceInternal.Selector.setInterrupt(Selector.java:347)
 at IceInternal.Selector.remove(Selector.java:107)
 at IceInternal.ThreadPool.finish(ThreadPool.java:183)
 at Ice.ConnectionI.setState(ConnectionI.java:1454)
 at Ice.ConnectionI.setState(ConnectionI.java:1351)
 at Ice.ConnectionI.sendRequest(ConnectionI.java:383)
 at IceInternal.ConnectionRequestHandler.sendRequest(ConnectionRequestHandler.java:36)
 at IceInternal.Outgoing.invoke(Outgoing.java:66)
 at omero.api._IQueryDelM.findAllByQuery(_IQueryDelM.java:259)
 at omero.api.IQueryPrxHelper.findAllByQuery(IQueryPrxHelper.java:320)
 at omero.api.IQueryPrxHelper.findAllByQuery(IQueryPrxHelper.java:292)
 at org.openmicroscopy.shoola.env.data.OMEROGateway.findAnnotationLinks(OMEROGateway.java:3639)
 ... 10 more
Caused by: java.nio.channels.ClosedByInterruptException
 at java.nio.channels.spi.AbstractInterruptibleChannel.end(Unknown Source)
 at sun.nio.ch.SocketChannelImpl.write(Unknown Source)
 at sun.nio.ch.SinkChannelImpl.write(Unknown Source)
 at IceInternal.Selector.setInterrupt(Selector.java:343)
 ... 21 more
State: 3Data Retrieval Failure: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data. 
Cannot retrieve the requested link for the specified children
 at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:891)
 at org.openmicroscopy.shoola.env.data.OMEROGateway.findAnnotationLinks(OMEROGateway.java:3641)
 at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:779)
 at org.openmicroscopy.shoola.env.data.OmeroMetadataServiceImpl.loadStructuredData(OmeroMetadataServiceImpl.java:835)
 at org.openmicroscopy.shoola.env.data.views.calls.StructuredAnnotationLoader$6.doCall(StructuredAnnotationLoader.java:211)
 at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144)
 at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226)
 at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126)
 at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165)
 at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:276)
 at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91)
 at java.lang.Thread.run(Unknown Source)
Caused by: Ice.SocketException
    error = 0
 at IceInternal.Selector.setInterrupt(Selector.java:347)
 at IceInternal.Selector.remove(Selector.java:107)
 at IceInternal.ThreadPool.finish(ThreadPool.java:183)
 at Ice.ConnectionI.setState(ConnectionI.java:1454)
 at Ice.ConnectionI.setState(ConnectionI.java:1351)
 at Ice.ConnectionI.sendRequest(ConnectionI.java:383)
 at IceInternal.ConnectionRequestHandler.sendRequest(ConnectionRequestHandler.java:36)
 at IceInternal.Outgoing.invoke(Outgoing.java:66)
 at omero.api._IQueryDelM.findAllByQuery(_IQueryDelM.java:259)
 at omero.api.IQueryPrxHelper.findAllByQuery(IQueryPrxHelper.java:320)
 at omero.api.IQueryPrxHelper.findAllByQuery(IQueryPrxHelper.java:292)
 at org.openmicroscopy.shoola.env.data.OMEROGateway.findAnnotationLinks(OMEROGateway.java:3639)
 ... 10 more
Caused by: java.nio.channels.ClosedByInterruptException
 at java.nio.channels.spi.AbstractInterruptibleChannel.end(Unknown Source)
 at sun.nio.ch.SocketChannelImpl.write(Unknown Source)
 at sun.nio.ch.SinkChannelImpl.write(Unknown Source)
 at IceInternal.Selector.setInterrupt(Selector.java:343)
 ... 21 more
Exception in thread "AWT-EventQueue-0"

Change History (2)

comment:1 Changed 11 years ago by rkferguson

  • Description modified (diff)

comment:2 Changed 11 years ago by jburel

  • Resolution set to duplicate
  • Status changed from new to closed

closed in favor of #10116. Same error

Last edited 11 years ago by jburel (previous) (diff)
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