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User Story #7400 (closed)

Opened 12 years ago

Closed 11 years ago

SCIFIO-refactoring-Bio-Formats

Reported by:	mhiner-x	Owned by:	mhiner-x
Priority:	major	Milestone:	Unscheduled
Component:	Bio-Formats	Keywords:	n.a.
Cc:	jamoore, mlinkert, crueden-x	Story Points:	n.a.
Sprint:	n.a.	Importance:	n.a.
Total Remaining Time:	n.a.	Estimated Remaining Time:	n.a.

Description

Convert readers and writers in components/bio-formats loci.formats.* to the SCIFIO API, deprecating the old class hierarchy while keeping it functional via delegation.

References

Referenced by:

← Requirement (#7690): SCIFIO
References:
→ Task (#7523): Convert ZeissZVIReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7529): Convert ZeissLSMReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7510): Convert ZeissCZIReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7489): Convert WATOPReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7503): Convert VolocityReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7509): Convert VolocityClippingReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7472): Convert VisitechReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7499): Convert VarianFDFReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7487): Convert VGSAMReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7519): Convert UnisokuReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7492): Convert UBMReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7553): Convert TrestleReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7491): Convert TopometrixReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7481): Convert TillVisionReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7485): Convert TargaReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7540): Convert TCSReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7502): Convert SpiderReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7469): Convert SlidebookReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7551): Convert SimplePCITiffReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7490): Convert SeikoReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7517): Convert ScanrReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7534): Convert SVSReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7558): Convert SMCameraReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7554): Convert SISReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7530): Convert SEQReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7468): Convert SDTReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7559): Convert SBIGReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7495): Convert RHKReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7493): Convert QuesantReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7544): Convert PrairieReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7549): Convert PhotoshopTiffReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7515): Convert PerkinElmerReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7474): Convert PSDReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7520): Convert PDSReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7527): Convert PCIReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7486): Convert OxfordInstrumentsReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7557): Convert OpenlabReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7466): Convert OpenlabRawReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7548): Convert NikonTiffReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7542): Convert NikonReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7552): Convert NikonElementsTiffReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7512): Convert NiftiReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7538): Convert NDPIReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7526): Convert ND2Reader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7478): Convert NAFReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7496): Convert MolecularImagingReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7547): Convert MetamorphTiffReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7545): Convert MetamorphReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7480): Convert MRWReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7462): Convert MRCReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7479): Convert MINCReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7539): Convert MIASReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7484): Convert LiFlimReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7541): Convert LeicaReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7473): Convert LIMReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7467): Convert LIFReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7536): Convert LEOReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7476): Convert L2DReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7508): Convert KodakReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7471): Convert KhorosReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7525): Convert JPXReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7537): Convert JPKReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7511): Convert JEOLReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7460): Convert IvisionReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7475): Convert InCellReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7501): Convert InCell3000Reader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7546): Convert ImprovisionTiffReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7532): Convert ImarisTiffReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7465): Convert ImarisReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7528): Convert ImarisHDFReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7504): Convert ImagicReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7535): Convert ImaconReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7524): Convert IPWReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7459): Convert IPLabReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7507): Convert INRReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7560): Convert HitachiReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7505): Convert HamamatsuVMSReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7488): Convert HISReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7531): Convert GelReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7463): Convert GatanReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7464): Convert GatanDM2Reader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7543): Convert FluoviewReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7533): Convert FlexReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7458): Convert FitsReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7522): Convert FV1000Reader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7550): Convert FEITiffReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7477): Convert FEIReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7498): Convert Ecat7Reader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7461): Convert DeltavisionReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7555): Convert DNGReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7483): Convert CellomicsReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7497): Convert CellWorxReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7506): Convert CellSensReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7556): Convert BurleighReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7561): Convert BrukerReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7521): Convert BioRadReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7494): Convert BioRadGelReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7518): Convert BDReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7513): Convert AnalyzeReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7516): Convert AmiraReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7470): Convert AliconaReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7482): Convert ARFReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7514): Convert APLReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold ) → Task (#7500): Convert AIMReader to SCIFIO components ( Owner: mhiner-x Keywords: scifio_hold )

Change History (1)

comment:1 Changed 11 years ago by mhiner-x

Resolution set to duplicate
Status changed from new to closed

Moved to the OME-Formats project.

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