id	summary	reporter	owner	description	type	status	priority	milestone	component	resolution	keywords	cc	rd_points	sprint	story_priority
4271	Batch annotation import	cxallan		"Overarching story for the import of batch annotations. The basic initial workflow to be investigated is:

 * Python script takes Plate, Project or Dataset input container and CSV file
 * CSV headers are parsed, locating key referential columns such as ""plate"", ""well"", ""column"", ""row"" or ""image""
 * An OmeroTables instance is created with the source annotation data and associated with the target container (namespace: openmicroscopy.org/omero/batch_annotation)

Additional functionality to be explored:

 * Annotation templates which use OmeroScripts and the {{{DeleteSpecification}}} of wiki:Delete to specify OMERO model entities and fields to update based on the batch annotation source.
 * OmeroScripts integrations with OMERO.insight to allow the upload of an attachment and subsequent processing of the batch annotation file in a completely user driven manner.
 * Batch Annotation on Import - #1797."	story	accepted	minor	Unscheduled	General			jburel