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Task #11265 (closed)

Opened 11 years ago

Closed 11 years ago

Bug: Volocity 6.1.1 dataset not opened

Reported by:	mlinkert	Owned by:	mlinkert
Priority:	major	Milestone:	Unscheduled
Component:	Bio-Formats	Version:	4.4.8
Keywords:	n.a.	Cc:	bf@…, stephane.dallongeville@…
Resources:	n.a.	Referenced By:	n.a.
References:	n.a.	Remaining Time:	n.a.
Sprint:	n.a.

Description

See the dataset in volocity/stephane/130329. The following exception is thrown:

Exception in thread "main" java.io.FileNotFoundException: /home/melissa/data/volocity/stephane/130329/Data/0.dat (No such file or directory)
	at java.io.RandomAccessFile.open(Native Method)
	at java.io.RandomAccessFile.<init>(RandomAccessFile.java:233)
	at ome.scifio.io.NIOFileHandle.<init>(NIOFileHandle.java:130)
	at ome.scifio.io.NIOFileHandle.<init>(NIOFileHandle.java:141)
	at ome.scifio.io.NIOFileHandle.<init>(NIOFileHandle.java:150)
	at ome.scifio.io.Location.getHandle(Location.java:309)
	at ome.scifio.io.Location.getHandle(Location.java:280)
	at ome.scifio.io.Location.getHandle(Location.java:270)
	at ome.scifio.io.RandomAccessInputStream.<init>(RandomAccessInputStream.java:108)
	at loci.common.RandomAccessInputStream.<init>(RandomAccessInputStream.java:73)
	at loci.formats.in.VolocityReader.initFile(VolocityReader.java:469)
	at loci.formats.FormatReader.setId(FormatReader.java:1333)
	at loci.formats.ImageReader.setId(ImageReader.java:762)
	at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:564)
	at loci.formats.tools.ImageInfo.testRead(ImageInfo.java:1017)
	at loci.formats.tools.ImageInfo.main(ImageInfo.java:1062)

References

Change History (2)

comment:1 Changed 11 years ago by mlinkert

There is a similar problem as well with volocity/stephane/13062013/.

comment:2 Changed 11 years ago by mlinkert

Resolution set to fixed
Status changed from new to closed

Fixed with: https://github.com/openmicroscopy/bioformats/pull/777

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