Task #11257 (closed)
Opened 11 years ago
Closed 11 years ago
Bug: MINC 2.0 data not correctly supported
Reported by: | mlinkert | Owned by: | mlinkert |
---|---|---|---|
Priority: | major | Milestone: | Testing and Docs |
Component: | Bio-Formats | Version: | 4.4.8 |
Keywords: | n.a. | Cc: | bf@…, kevin@… |
Resources: | n.a. | Referenced By: | n.a. |
References: | n.a. | Remaining Time: | n.a. |
Sprint: | Testing and Docs (1) |
Description
See one example in minc/bigbrain/; many more examples from http://bigbrain.loris.ca
This exception is thrown because the "image" variable is not in the expected location:
Exception in thread "main" java.lang.NullPointerException at loci.formats.services.NetCDFServiceImpl.getArray(NetCDFServiceImpl.java:168) at loci.formats.services.NetCDFServiceImpl.getVariableValue(NetCDFServiceImpl.java:150) at loci.formats.in.MINCReader.initFile(MINCReader.java:165) at loci.formats.FormatReader.setId(FormatReader.java:1333) at loci.formats.ImageReader.setId(ImageReader.java:762) at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:564) at loci.formats.tools.ImageInfo.testRead(ImageInfo.java:1017) at loci.formats.tools.ImageInfo.main(ImageInfo.java:1062)
Change History (2)
comment:1 Changed 11 years ago by mlinkert
- Cc kevin@… added
comment:2 Changed 11 years ago by mlinkert
- Resolution set to fixed
- Status changed from new to closed
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Pull request opened: https://github.com/openmicroscopy/bioformats/pull/605