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Ticket Summary Status Owner Type Priority Milestone
#4084 Implement OMERO upload and download logic new crueden-x task critical Unscheduled
#7690 SCIFIO new mhiner-x requirement critical Unscheduled
#8204 Test BF-CPP for compilation and runtime errors on Windows 32/64-bit new mhiner-x task critical Unscheduled
#8464 bfconvert does not exit nonzero if conversion failed new mlinkert task critical Unscheduled
#8576 SCIFIO-AWT Component new mhiner-x story critical Unscheduled
#8577 SCIFIO-tools component new mhiner-x story critical Unscheduled
#8797 Fix remaining issues with Maven build system new mlinkert task critical OMERO-4.4.9
#9293 Create loci.common delegators new mhiner-x task critical Unscheduled
#9294 Integrate Scifio-Refactor with Develop new mhiner-x story critical Unscheduled
#9343 Update loci.formats classes new mhiner-x task critical Unscheduled
#9462 Write unit tests for new classes new mhiner-x task critical Unscheduled
#9544 Bug: very large .jp2 files do not import correctly new mlinkert task critical OMERO-4.4.9
#10770 BUG: ome_tools.jar exception new mlinkert task critical OMERO-4.4.9
#4089 FB 863: Allow sending feedback from loci tools new mlinkert task major Unscheduled
#4097 Add support for Patch-Master electrophysiology files new mlinkert task major Unscheduled
#4098 Add support for datasets produced by Vevo 770 new mlinkert task major Unscheduled
#4107 More robust support for 1, 2 and 4 bit images new mlinkert task major Unscheduled
#4111 Add support for Leica OME data new rleigh task major OMERO-4.4.x
#4113 Add support for .nex file format new mlinkert task major Unscheduled
#4114 Better support for N-dimensional data new mhiner-x task major Unscheduled
#4116 Serialize reader state new cxallan requirement major Future
#4119 Support for CRi .im3 format new mlinkert task major Unscheduled
#4120 Add support for Intervision MV format new mlinkert task major Unscheduled
#4121 Add support for Mirax data new mlinkert task major OMERO-4.4.x
#4124 Add support for Matlab matrix files new mlinkert task major Unscheduled
#4125 Add support for OpenEXR files new mlinkert task major Unscheduled
#4128 AVI writer does not support saving tiles new mlinkert task major Unscheduled
#4129 APNG writer does not support saving tiles new mlinkert task major Unscheduled
#4130 Java writer does not support saving tiles new mlinkert task major Unscheduled
#4131 JPEG-2000 writer does not support saving tiles new mlinkert task major Unscheduled
#4132 JPEG writer does not support saving tiles new mlinkert task major Unscheduled
#4133 OME-XML writer does not support saving tiles new mlinkert task major Unscheduled
#4147 Add support for Varian FID files new mlinkert task major Unscheduled
#4150 Add support for Zeiss .lms files new mlinkert task major Unscheduled
#4154 Add support for OME-TIFF files produced by Leica Matrix scanner new rleigh task major OMERO-4.4.x
#4155 Expand (and clean up) use of new 'setWriteSequentially' method new mlinkert task major Unscheduled
#4157 Make it easier to get/set the pixels' compression type new mlinkert task major Unscheduled
#4159 Add support for DICOM supplement #145 new mlinkert task major Unscheduled
#4163 Make error message windows more friendly new mlinkert task major Unscheduled
#4164 Move color options to a separate dialog new crueden-x task major Unscheduled
#4165 Consider writing decoder for compressed Flex files new mlinkert task major Unscheduled
#4166 Add support for TIFF files with FillOrder == 2 new mlinkert task major Unscheduled
#4167 Writers do not support overwriting metadata new mlinkert task major Unscheduled
#4169 Add support for Micro-CT VOL files new mlinkert task major Unscheduled
#4171 Overwriting compressed planes doesn't always work new mlinkert task major Unscheduled
#4179 Add support for Leica Stereo Microscope data new mlinkert task major Unscheduled
#4180 Add support for Image-Pro .ips metadata files new mlinkert task major Unscheduled
#4185 Add support for Zeiss FCS files new mlinkert task major Unscheduled
#4190 Add reader wrapper that provides simpler tile access new mlinkert task major Unscheduled
#6229 Bio-Formats JAI ImageIO service examination new mlinkert task major Unscheduled
#6589 Update TiffWriter to automatically switch to BigTIFF new mlinkert task major Unscheduled
#6617 RFE: require ome option in screen file format option new jburel task major Unscheduled
#6721 Investigate improving performance of TIFF export with setWriteSequential(false) new mlinkert task major Unscheduled
#6824 Add support for .emi files new mlinkert task major Unscheduled
#7092 Improve metadata support for Cellomics datasets new mlinkert task major OMERO-5
#7399 SCIFIO-refactoring-core new mhiner-x story major Unscheduled
#7400 SCIFIO-refactoring-Bio-Formats new mhiner-x story major Unscheduled
#7402 SCIFIO-performance new mhiner-x story major Unscheduled
#7403 SCIFIO-refactoring-OME new mhiner-x story major Unscheduled
#7404 SCIFIO-license new mhiner-x story major Unscheduled
#7407 Include SCIFIO core in VisAD new mhiner-x task major Unscheduled
#7409 Announce license change to VCell developers new mhiner-x task major Unscheduled
#7411 Review API after completion of Proof of concept tickets new mhiner-x task major Unscheduled
#7414 Convert BMPReader to SCIFIO components new mhiner-x task major Unscheduled
#7415 Convert DicomReader to SCIFIO components new mhiner-x task major Unscheduled
#7416 Convert FakeReader to SCIFIO components new mhiner-x task major Unscheduled
#7417 Convert GIFReader to SCIFIO components new mhiner-x task major Unscheduled
#7418 Convert MNGReader to SCIFIO components new mhiner-x task major Unscheduled
#7419 Convert MicromanagerReader to SCIFIO components new mhiner-x task major Unscheduled
#7420 Convert NRRDReader to SCIFIO components new mhiner-x task major Unscheduled
#7421 Convert PCXReader to SCIFIO components new mhiner-x task major Unscheduled
#7422 Convert PGMReader to SCIFIO components new mhiner-x task major Unscheduled
#7423 Convert PictReader to SCIFIO components new mhiner-x task major Unscheduled
#7424 Convert TextReader to SCIFIO components new mhiner-x task major Unscheduled
#7425 Convert ZipReader to SCIFIO components new mhiner-x task major Unscheduled
#7426 Convert OMETiffReader to SCIFIO components new mhiner-x task major Unscheduled
#7427 Convert OMEXMLReader to SCIFIO components new mhiner-x task major Unscheduled
#7428 Convert TiffDelegateReader to SCIFIO components new mhiner-x task major Unscheduled
#7429 Convert JPEG2000Reader to SCIFIO components new mhiner-x task major Unscheduled
#7430 Convert JPEGReader to SCIFIO components new mhiner-x task major Unscheduled
#7431 Convert AVIReader to SCIFIO components new mhiner-x task major Unscheduled
#7432 Convert QTReader to SCIFIO components new mhiner-x task major Unscheduled
#7433 Convert EPSReader to SCIFIO components new mhiner-x task major Unscheduled
#7434 Migrate OME-TIFF components from SCIFIO to OME-XML component new mhiner-x task major Unscheduled
#7435 Migrate OME-XML components from SCIFIO to OME-XML component new mhiner-x task major Unscheduled
#7436 Change build systems to reflect new dependency hierarchy new mhiner-x task major Unscheduled
#7437 Create BMPReader to OME translator new mhiner-x task major Unscheduled
#7438 Create DicomReader to OME translator new mhiner-x task major Unscheduled
#7439 Create FakeReader to OME translator new mhiner-x task major Unscheduled
#7440 Create GIFReader to OME translator new mhiner-x task major Unscheduled
#7441 Create MNGReader to OME translator new mhiner-x task major Unscheduled
#7442 Create MicromanagerReader to OME translator new mhiner-x task major Unscheduled
#7443 Create NRRDReader to OME translator new mhiner-x task major Unscheduled
#7444 Create PCXReader to OME translator new mhiner-x task major Unscheduled
#7445 Create PGMReader to OME translator new mhiner-x task major Unscheduled
#7446 Create PictReader to OME translator new mhiner-x task major Unscheduled
#7447 Create TextReader to OME translator new mhiner-x task major Unscheduled
#7448 Create ZipReader to OME translator new mhiner-x task major Unscheduled
#7449 Create TiffDelegateReader to OME translator new mhiner-x task major Unscheduled
#7450 Create JPEG2000Reader to OME translator new mhiner-x task major Unscheduled
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