Warning: Can't synchronize with repository "(default)" (/home/git/ome.git does not appear to be a Git repository.). Look in the Trac log for more information.
Notice: In order to edit this ticket you need to be either: a Product Owner, The owner or the reporter of the ticket, or, in case of a Task not yet assigned, a team_member"

Task #4177 (accepted)

Opened 13 years ago

Last modified 8 years ago

Certain JPEG-2000 files are not read correctly

Reported by: mlinkert Owned by:
Priority: major Milestone: Unscheduled
Component: Bio-Formats Version: OMERO-5.2.0
Keywords: JPEG2000Reader, codec, external Cc: mtemple@…
Resources: n.a. Referenced By: n.a.
References: n.a. Remaining Time: n.a.
Sprint: n.a.

Description (last modified by mlinkert)

See data/jpeg2000/mike/LCM-4-3-color-cleaned.jp2. This file cannot be read by ImageMagick?, but can be read by Aperio's ImageScope? software.

Cursory investigation indicates that there's something funny with the codestream markers - where one would expect to see '0xff', there is instead '0x3f'.

Change History (10)

comment:1 Changed 13 years ago by jmoore

imported from bio-formats:#618

comment:2 Changed 13 years ago by mlinkert

  • Description modified (diff)
  • Remaining Time set to 2
  • Sprint set to 2011-02-10 (5)

comment:3 Changed 13 years ago by jburel

  • Sprint changed from 2011-02-10 (5) to 2011-02-24 (6)

Moved from sprint 2011-02-10 (5)

comment:4 Changed 13 years ago by jburel

  • Sprint changed from 2011-02-24 (6) to 2011-03-10 (7)

Moved from sprint 2011-02-24 (6)

comment:5 Changed 13 years ago by mlinkert

  • Status changed from new to accepted

comment:6 Changed 13 years ago by jburel

  • Sprint changed from 2011-03-10 (7) to 2011-03-24 (8)

Moved from sprint 2011-03-10 (7)

comment:7 Changed 13 years ago by mlinkert

  • Sprint 2011-03-24 (8) deleted

comment:8 Changed 13 years ago by mlinkert

  • Sprint set to 2011-04-21 (10)

comment:9 Changed 13 years ago by mlinkert

  • Milestone changed from OMERO-Beta4.3 to Unscheduled
  • Sprint 2011-04-21 (10) deleted

comment:10 Changed 8 years ago by mlinkert

  • Keywords JPEG2000Reader codec external added
  • Owner mlinkert deleted
  • Remaining Time 2 deleted
  • Version set to OMERO-5.2.0
Note: See TracTickets for help on using tickets. You may also have a look at Agilo extensions to the ticket.

1.3.13-PRO © 2008-2011 Agilo Software all rights reserved (this page was served in: 0.108337 sec.)

We're Hiring!